HL_9PJ9_005
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- GGUAGUGGC
- Length
- 9 nucleotides
- Bulged bases
- 9PJ9|1|A|G|268
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PJ9_005 not in the Motif Atlas
- Homologous match to HL_6CZR_077
- Geometric discrepancy: 0.2299
- The information below is about HL_6CZR_077
- Detailed Annotation
- GNRA related
- Broad Annotation
- GNRA related
- Motif group
- HL_84299.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9PJ9|1|A|G|261
9PJ9|1|A|G|262
9PJ9|1|A|U|263
9PJ9|1|A|A|264
9PJ9|1|A|G|265
9PJ9|1|A|U|266
9PJ9|1|A|G|267
9PJ9|1|A|G|268
9PJ9|1|A|C|269
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain Q
- 30S ribosomal protein S17
- Chain T
- 30S ribosomal protein S20
Coloring options: