HL_9PJ9_038

3D structure

PDB id

9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)

Description

C. acnes 70S ribosome bound to Minocycline

Experimental method

ELECTRON MICROSCOPY

Resolution

2.5 Å

Loop

Sequence

UGAAUGUAUAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PJ9|1|a|U|164
9PJ9|1|a|G|165
9PJ9|1|a|A|166
9PJ9|1|a|A|167
9PJ9|1|a|U|168
9PJ9|1|a|G|169
9PJ9|1|a|U|170
9PJ9|1|a|A|171
9PJ9|1|a|U|172
9PJ9|1|a|A|173
9PJ9|1|a|G|174

Current chains

Chain a

23S rRNA

Nearby chains

Chain w

50S ribosomal protein L28