HL_9PJ9_046
3D structure
- PDB id
- 9PJ9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- C. acnes 70S ribosome bound to Minocycline
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.5 Å
Loop
- Sequence
- ACUCGUGGAAU
- Length
- 11 nucleotides
- Bulged bases
- 9PJ9|1|a|G|475
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PJ9_046 not in the Motif Atlas
- Homologous match to HL_7A0S_013
- Geometric discrepancy: 0.3679
- The information below is about HL_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.8
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9PJ9|1|a|A|471
9PJ9|1|a|C|472
9PJ9|1|a|U|473
9PJ9|1|a|C|474
9PJ9|1|a|G|475
9PJ9|1|a|U|476
9PJ9|1|a|G|477
9PJ9|1|a|G|478
9PJ9|1|a|A|479
9PJ9|1|a|A|480
9PJ9|1|a|U|481
Current chains
- Chain a
- 23S rRNA
Nearby chains
- Chain w
- 50S ribosomal protein L28
Coloring options: