HL_9PKD_104
3D structure
- PDB id
- 9PKD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ CHX and HHT treated 80S consensus ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.42 Å
Loop
- Sequence
- UAUUUUGUUGGUUUUCG
- Length
- 17 nucleotides
- Bulged bases
- 9PKD|1|S2|G|891, 9PKD|1|S2|U|899
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PKD|1|S2|U|885
9PKD|1|S2|A|886
9PKD|1|S2|U|887
9PKD|1|S2|U|888
9PKD|1|S2|U|889
9PKD|1|S2|U|890
9PKD|1|S2|G|891
9PKD|1|S2|U|892
9PKD|1|S2|U|893
9PKD|1|S2|G|894
9PKD|1|S2|G|895
9PKD|1|S2|U|896
9PKD|1|S2|U|897
9PKD|1|S2|U|898
9PKD|1|S2|U|899
9PKD|1|S2|C|900
9PKD|1|S2|G|901
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SG
- 40S ribosomal protein S6
Coloring options: