HL_9PN5_110

3D structure

PDB id

9PN5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Composite map of hypomethylated 80S ribosome treated with hygromycin B

Experimental method

ELECTRON MICROSCOPY

Resolution

1.75 Å

Loop

Sequence

GGCAAC

Length

6 nucleotides

Bulged bases

9PN5|1|B5|G|1699, 9PN5|1|B5|A|1701, 9PN5|1|B5|A|1702

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PN5|1|B5|G|1698
9PN5|1|B5|G|1699
9PN5|1|B5|C|1700
9PN5|1|B5|A|1701
9PN5|1|B5|A|1702
9PN5|1|B5|C|1703

Current chains

Chain B5

18S rRNA

Nearby chains