3D structure

PDB id
9PRA (explore in PDB, NAKB, or RNA 3D Hub)
Description
In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu
Experimental method
ELECTRON MICROSCOPY
Resolution
2.83 Å

Loop

Sequence
GCAGAACCCAACC
Length
13 nucleotides
Bulged bases
9PRA|1|A|G|2831, 9PRA|1|A|A|2832, 9PRA|1|A|C|2839
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PRA|1|A|G|2828
9PRA|1|A|C|2829
9PRA|1|A|A|2830
9PRA|1|A|G|2831
9PRA|1|A|A|2832
9PRA|1|A|A|2833
9PRA|1|A|C|2834
9PRA|1|A|C|2835
9PRA|1|A|C|2836
9PRA|1|A|A|2837
9PRA|1|A|A|2838
9PRA|1|A|C|2839
9PRA|1|A|C|2840

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 6
39S ribosomal protein L38, mitochondrial
Chain N
39S ribosomal protein L16, mitochondrial
Chain W
39S ribosomal protein L27, mitochondrial
Chain Z
39S ribosomal protein L30, mitochondrial
Chain f
39S ribosomal protein L48, mitochondrial

Coloring options:

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