HL_9PRA_036

3D structure

PDB id

9PRA (explore in PDB, NAKB, or RNA 3D Hub)

Description

In Situ Structure of the Human Mitoribosome Large Subunit 39S in Complex with EF-Tu

Experimental method

ELECTRON MICROSCOPY

Resolution

2.83 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PRA_036 not in the Motif Atlas

Geometric match to HL_8OI5_061

Geometric discrepancy: 0.0711

The information below is about HL_8OI5_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

9PRA|1|A|C|3126
9PRA|1|A|G|3127
9PRA|1|A|A|3128
9PRA|1|A|A|3129
9PRA|1|A|A|3130
9PRA|1|A|G|3131

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain Ad

Mitochondrial assembly of ribosomal large subunit protein 1

Chain Ag

Elongation factor Tu, mitochondrial