HL_9PRQ_011
3D structure
- PDB id
- 9PRQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.34 Å
Loop
- Sequence
- GGAACAGC
- Length
- 8 nucleotides
- Bulged bases
- 9PRQ|1|A|A|2110, 9PRQ|1|A|G|2113
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PRQ_011 not in the Motif Atlas
- Homologous match to HL_7A0S_026
- Geometric discrepancy: 0.2575
- The information below is about HL_7A0S_026
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.4
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 399
Unit IDs
9PRQ|1|A|G|2107
9PRQ|1|A|G|2108
9PRQ|1|A|A|2109
9PRQ|1|A|A|2110
9PRQ|1|A|C|2111
9PRQ|1|A|A|2112
9PRQ|1|A|G|2113
9PRQ|1|A|C|2114
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain I
- 39S ribosomal protein L10, mitochondrial
- Chain N
- 39S ribosomal protein L16, mitochondrial
- Chain o
- Ribosomal protein 63, mitochondrial
Coloring options: