3D structure

PDB id
9PRQ (explore in PDB, NAKB, or RNA 3D Hub)
Description
In situ structure of human mitoribosome in the A/T-P state from TACO1-knockout cells
Experimental method
ELECTRON MICROSCOPY
Resolution
3.34 Å

Loop

Sequence
AAUGAUAUCAUCUCAACU
Length
18 nucleotides
Bulged bases
9PRQ|1|A|U|3183, 9PRQ|1|A|C|3189
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9PRQ|1|A|A|3176
9PRQ|1|A|A|3177
9PRQ|1|A|U|3178
9PRQ|1|A|G|3179
9PRQ|1|A|A|3180
9PRQ|1|A|U|3181
9PRQ|1|A|A|3182
9PRQ|1|A|U|3183
9PRQ|1|A|C|3184
9PRQ|1|A|A|3185
9PRQ|1|A|U|3186
9PRQ|1|A|C|3187
9PRQ|1|A|U|3188
9PRQ|1|A|C|3189
9PRQ|1|A|A|3190
9PRQ|1|A|A|3191
9PRQ|1|A|C|3192
9PRQ|1|A|U|3193

Current chains

Chain A
16S mitochondrial rRNA

Nearby chains

Chain 4
39S ribosomal protein L36, mitochondrial
Chain K
Large ribosomal subunit protein uL13m
Chain k
Large ribosomal subunit protein mL53
Chain r
39S ribosomal protein S18a, mitochondrial

Coloring options:

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