HL_9PRX_006

3D structure

PDB id

9PRX (explore in PDB, NAKB, or RNA 3D Hub)

Description

In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells

Experimental method

ELECTRON MICROSCOPY

Resolution

3.23 Å

Loop

Sequence

GAGAGC

Length

6 nucleotides

Bulged bases

9PRX|1|A|G|1886

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9PRX|1|A|G|1884
9PRX|1|A|A|1885
9PRX|1|A|G|1886
9PRX|1|A|A|1887
9PRX|1|A|G|1888
9PRX|1|A|C|1889

Current chains

Chain A

16S mitochondrial rRNA

Nearby chains

Chain 3

39S ribosomal protein L35, mitochondrial

Chain F

39S ribosomal protein L4, mitochondrial

Chain M

39S ribosomal protein L15, mitochondrial

Chain g

39S ribosomal protein L49, mitochondrial

Chain i

39S ribosomal protein L51, mitochondrial