HL_9PRX_063
3D structure
- PDB id
- 9PRX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.23 Å
Loop
- Sequence
- GCCCAUACC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PRX_063 not in the Motif Atlas
- Geometric match to HL_8B0X_031
- Geometric discrepancy: 0.1112
- The information below is about HL_8B0X_031
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9PRX|1|Ax|G|28
9PRX|1|Ax|C|29
9PRX|1|Ax|C|30
9PRX|1|Ax|C|31
9PRX|1|Ax|A|32
9PRX|1|Ax|U|33
9PRX|1|Ax|A|34
9PRX|1|Ax|C|35
9PRX|1|Ax|C|36
Current chains
- Chain Ax
- P/P-tRNA
Nearby chains
- Chain 8
- 39S ribosomal protein L40, mitochondrial
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain Az
- mRNA
Coloring options: