HL_9PS7_066
3D structure
- PDB id
- 9PS7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/T-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.08 Å
Loop
- Sequence
- ACUUUCAAU
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PS7_066 not in the Motif Atlas
- Homologous match to HL_1U0B_002
- Geometric discrepancy: 0.2764
- The information below is about HL_1U0B_002
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_81376.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 43
Unit IDs
9PS7|1|Ay|A|31
9PS7|1|Ay|C|32
9PS7|1|Ay|U|33
9PS7|1|Ay|U|34
9PS7|1|Ay|U|35
9PS7|1|Ay|C|36
9PS7|1|Ay|A|37
9PS7|1|Ay|A|38
9PS7|1|Ay|U|39
Current chains
- Chain Ay
- E/E-tRNA
Nearby chains
- Chain AA
- Small subunit ribosomal RNA; SSU rRNA
- Chain AF
- 28S ribosomal protein S7, mitochondrial
- Chain AI
- 28S ribosomal protein S11, mitochondrial
- Chain Ax
- P/P-tRNA
- Chain Az
- mRNA
Coloring options: