HL_9PSI_038
3D structure
- PDB id
- 9PSI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A-P-E state from TACO1-knockout cells
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.12 Å
Loop
- Sequence
- AAUGAUAUCAUCUCAACU
- Length
- 18 nucleotides
- Bulged bases
- 9PSI|1|A|U|3183, 9PSI|1|A|C|3189
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9PSI|1|A|A|3176
9PSI|1|A|A|3177
9PSI|1|A|U|3178
9PSI|1|A|G|3179
9PSI|1|A|A|3180
9PSI|1|A|U|3181
9PSI|1|A|A|3182
9PSI|1|A|U|3183
9PSI|1|A|C|3184
9PSI|1|A|A|3185
9PSI|1|A|U|3186
9PSI|1|A|C|3187
9PSI|1|A|U|3188
9PSI|1|A|C|3189
9PSI|1|A|A|3190
9PSI|1|A|A|3191
9PSI|1|A|C|3192
9PSI|1|A|U|3193
Current chains
- Chain A
- 16S mitochondrial rRNA
Nearby chains
- Chain 4
- 39S ribosomal protein L36, mitochondrial
- Chain K
- Large ribosomal subunit protein uL13m
- Chain k
- Large ribosomal subunit protein mL53
- Chain r
- 39S ribosomal protein S18a, mitochondrial
Coloring options: