HL_9PSM_053
3D structure
- PDB id
- 9PSM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ structure of the human mitoribosome in the A/P-P/E state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.98 Å
Loop
- Sequence
- GAUAAACCCC
- Length
- 10 nucleotides
- Bulged bases
- 9PSM|1|AA|C|1225
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9PSM_053 not in the Motif Atlas
- Homologous match to HL_6CZR_092
- Geometric discrepancy: 0.3575
- The information below is about HL_6CZR_092
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.3
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9PSM|1|AA|G|1217
9PSM|1|AA|A|1218
9PSM|1|AA|U|1219
9PSM|1|AA|A|1220
9PSM|1|AA|A|1221
9PSM|1|AA|A|1222
9PSM|1|AA|C|1223
9PSM|1|AA|C|1224
9PSM|1|AA|C|1225
9PSM|1|AA|C|1226
Current chains
- Chain AA
- 12S mitochondrial rRNA
Nearby chains
- Chain AG
- 28S ribosomal protein S9, mitochondrial
- Chain AH
- 28S ribosomal protein S10, mitochondrial
- Chain Aw
- A/P-tRNA
- Chain Ax
- Transfer RNA; tRNA
Coloring options: