HL_9PZG_009

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9PZG|1|A|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PZG_009 not in the Motif Atlas

Geometric match to HL_6QN3_003

Geometric discrepancy: 0.1339

The information below is about HL_6QN3_003

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.2

Basepair signature

cWW-tSW-F

Number of instances in this motif group

60

Unit IDs

9PZG|1|A|C|342
9PZG|1|A|U|343
9PZG|1|A|A|344
9PZG|1|A|C|345
9PZG|1|A|G|346
9PZG|1|A|G|347

Current chains

Chain A

16S rRNA

Nearby chains