HL_9PZG_023

3D structure

PDB id

9PZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacterial ribosomal 2'-O-methyltransferase RsmI in complex with the small ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.42 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

9PZG|1|A|U|1030, 9PZG|1|A|C|1031, 9PZG|1|A|G|1032

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9PZG_023 not in the Motif Atlas

Geometric match to HL_4YAZ_004

Geometric discrepancy: 0.2263

The information below is about HL_4YAZ_004

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.3

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

9PZG|1|A|C|1028
9PZG|1|A|U|1029
9PZG|1|A|U|1030
9PZG|1|A|C|1031
9PZG|1|A|G|1032
9PZG|1|A|G|1033

Current chains

Chain A

16S rRNA

Nearby chains