HL_9Q2M_094

3D structure

PDB id

9Q2M (explore in PDB, NAKB, or RNA 3D Hub)

Description

Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

UAUUUUGUUGGUUUUCG

Length

17 nucleotides

Bulged bases

9Q2M|1|9|U|737

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9Q2M|1|9|U|732
9Q2M|1|9|A|733
9Q2M|1|9|U|734
9Q2M|1|9|U|735
9Q2M|1|9|U|736
9Q2M|1|9|U|737
9Q2M|1|9|G|738
9Q2M|1|9|U|739
9Q2M|1|9|U|740
9Q2M|1|9|G|741
9Q2M|1|9|G|742
9Q2M|1|9|U|743
9Q2M|1|9|U|744
9Q2M|1|9|U|745
9Q2M|1|9|U|746
9Q2M|1|9|C|747
9Q2M|1|9|G|748

Current chains

Chain 9

18S rRNA

Nearby chains

Chain LL

Small ribosomal subunit protein uS17