HL_9Q2M_113
3D structure
- PDB id
- 9Q2M (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF2, partial P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CUUAGCAUG
- Length
- 9 nucleotides
- Bulged bases
- 9Q2M|1|ET|A|34
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q2M_113 not in the Motif Atlas
- Homologous match to HL_4YCP_002
- Geometric discrepancy: 0.5044
- The information below is about HL_4YCP_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9Q2M|1|ET|C|31
9Q2M|1|ET|U|32
9Q2M|1|ET|U|33
9Q2M|1|ET|A|34
9Q2M|1|ET|G|35
9Q2M|1|ET|C|36
9Q2M|1|ET|A|37
9Q2M|1|ET|U|38
9Q2M|1|ET|G|39
Current chains
- Chain ET
- E site Ala-tRNA
Nearby chains
- Chain 1
- NediV ORF
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain PT
- P site Ala-tRNA
- Chain QQ
- Small ribosomal subunit protein uS9
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