HL_9Q2P_008
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UAACCA
- Length
- 6 nucleotides
- Bulged bases
- 9Q2P|1|5|C|72
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q2P_008 not in the Motif Atlas
- Homologous match to HL_9PN5_002
- Geometric discrepancy: 0.1968
- The information below is about HL_9PN5_002
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_23875.1
- Basepair signature
- cWW-cSW-F
- Number of instances in this motif group
- 16
Unit IDs
9Q2P|1|5|U|68
9Q2P|1|5|A|69
9Q2P|1|5|A|70
9Q2P|1|5|C|71
9Q2P|1|5|C|72
9Q2P|1|5|A|73
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain L
- Large ribosomal subunit protein eL13
- Chain N
- 60S ribosomal protein L15
- Chain a
- 60S ribosomal protein L27a
- Chain i
- 60S ribosomal protein L36
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