3D structure

PDB id
9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
CCUUCCAGUCCG
Length
12 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q2P|1|5|C|1436
9Q2P|1|5|C|1437
9Q2P|1|5|U|1438
9Q2P|1|5|U|1440
9Q2P|1|5|C|1441
9Q2P|1|5|C|1442
9Q2P|1|5|A|1443
9Q2P|1|5|G|1444
9Q2P|1|5|U|1445
9Q2P|1|5|C|1446
9Q2P|1|5|C|1447
9Q2P|1|5|G|1448

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain C
60S ribosomal protein L4
Chain F
60S ribosomal protein L7
Chain Q
Large ribosomal subunit protein eL18
Chain b
eL29

Coloring options:

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