3D structure

PDB id
9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
Description
Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
Experimental method
ELECTRON MICROSCOPY
Resolution
3 Å

Loop

Sequence
GUGGCCAUGGAAGUCGGAAUC
Length
21 nucleotides
Bulged bases
9Q2P|1|5|U|1974
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9Q2P|1|5|G|1973
9Q2P|1|5|U|1974
9Q2P|1|5|G|1975
9Q2P|1|5|G|1976
9Q2P|1|5|C|1977
9Q2P|1|5|C|1978
9Q2P|1|5|A|1979
9Q2P|1|5|U|1980
9Q2P|1|5|G|1981
9Q2P|1|5|G|1982
9Q2P|1|5|A|1983
9Q2P|1|5|A|1984
9Q2P|1|5|G|1985
9Q2P|1|5|U|1986
9Q2P|1|5|C|1987
9Q2P|1|5|G|1988
9Q2P|1|5|G|1989
9Q2P|1|5|A|1990
9Q2P|1|5|A|1991
9Q2P|1|5|U|1992
9Q2P|1|5|C|1993

Current chains

Chain 5
28S ribosomal RNA

Nearby chains

Chain AT
Transfer RNA; tRNA
Chain I
Ribosomal protein L10
Chain s
60S acidic ribosomal protein P0
Chain t
uL11

Coloring options:

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