HL_9Q2P_092
3D structure
- PDB id
- 9Q2P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit ribosomal 80S elongation complex with eEF1A, A*/T Ala-tRNA, P site Ala-tRNA, E site Ala-tRNA on NediV ORF
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- UCAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q2P_092 not in the Motif Atlas
- Homologous match to HL_9PN5_085
- Geometric discrepancy: 0.2534
- The information below is about HL_9PN5_085
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_34789.6
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 434
Unit IDs
9Q2P|1|9|U|416
9Q2P|1|9|C|417
9Q2P|1|9|A|418
9Q2P|1|9|G|419
9Q2P|1|9|G|420
9Q2P|1|9|G|421
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain CC
- 40S ribosomal protein S2
- Chain JJ
- 40S ribosomal protein S9
- Chain LL
- Small ribosomal subunit protein uS17
- Chain WW
- 40S ribosomal protein S15a
- Chain XX
- 40S ribosomal protein S23
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