HL_9Q3Q_060
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- UGAAGUAG
- Length
- 8 nucleotides
- Bulged bases
- 9Q3Q|1|A|G|2529
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q3Q_060 not in the Motif Atlas
- Homologous match to HL_8B0X_088
- Geometric discrepancy: 0.0526
- The information below is about HL_8B0X_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_02262.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 36
Unit IDs
9Q3Q|1|A|U|2528
9Q3Q|1|A|G|2529
9Q3Q|1|A|A|2530
9Q3Q|1|A|A|2531
9Q3Q|1|A|G|2532
9Q3Q|1|A|U|2533
9Q3Q|1|A|A|2534
9Q3Q|1|A|G|2535
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 8
- Large ribosomal subunit protein bL36A
- Chain G
- Large ribosomal subunit protein uL6
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