HL_9Q3Q_079
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- AACUGAGACACGGU
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q3Q_079 not in the Motif Atlas
- Homologous match to HL_8B0X_007
- Geometric discrepancy: 0.0528
- The information below is about HL_8B0X_007
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_39665.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9Q3Q|1|a|A|320
9Q3Q|1|a|A|321
9Q3Q|1|a|C|322
9Q3Q|1|a|U|323
9Q3Q|1|a|G|324
9Q3Q|1|a|A|325
9Q3Q|1|a|G|326
9Q3Q|1|a|A|327
9Q3Q|1|a|C|328
9Q3Q|1|a|A|329
9Q3Q|1|a|C|330
9Q3Q|1|a|G|331
9Q3Q|1|a|G|332
9Q3Q|1|a|U|333
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain p
- Small ribosomal subunit protein bS16
- Chain t
- Small ribosomal subunit protein bS20
Coloring options: