HL_9Q3Q_099
3D structure
- PDB id
- 9Q3Q (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of translating Escherichia coli 70S ribosome bound to mRNA, P-site QKF-peptidyl-tRNAPhe, glycyl-tRNAGly in A/T conformation, EF-Tu-GDP, and bottromycin at 2.01A resolution
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.01 Å
Loop
- Sequence
- CUGCAACUCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q3Q_099 not in the Motif Atlas
- Homologous match to HL_8B0X_026
- Geometric discrepancy: 0.0678
- The information below is about HL_8B0X_026
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_93658.1
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9Q3Q|1|a|C|1314
9Q3Q|1|a|U|1315
9Q3Q|1|a|G|1316
9Q3Q|1|a|C|1317
9Q3Q|1|a|A|1318
9Q3Q|1|a|A|1319
9Q3Q|1|a|C|1320
9Q3Q|1|a|U|1321
9Q3Q|1|a|C|1322
9Q3Q|1|a|G|1323
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain m
- Small ribosomal subunit protein uS13
- Chain n
- Small ribosomal subunit protein uS14
- Chain s
- Small ribosomal subunit protein uS19
Coloring options: