HL_9Q6S_073

3D structure

PDB id

9Q6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-30 triazole derivative and protein Y at 2.90A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CUUUG

Length

5 nucleotides

Bulged bases

9Q6S|1|1a|U|202, 9Q6S|1|1a|U|204

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q6S_073 not in the Motif Atlas

Geometric match to HL_4LFB_005

Geometric discrepancy: 0.3296

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_90436.6

Basepair signature

cWW-F

Number of instances in this motif group

50

Unit IDs

9Q6S|1|1a|C|201
9Q6S|1|1a|U|202
9Q6S|1|1a|U|203
9Q6S|1|1a|U|204
9Q6S|1|1a|G|216

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains