HL_9Q6S_155

3D structure

PDB id

9Q6S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with pleuromutilin-30 triazole derivative and protein Y at 2.90A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q6S_155 not in the Motif Atlas

Homologous match to HL_8B0X_085

Geometric discrepancy: 0.1082

The information below is about HL_8B0X_085

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9Q6S|1|2A|C|2374
9Q6S|1|2A|G|2375
9Q6S|1|2A|A|2376
9Q6S|1|2A|A|2377
9Q6S|1|2A|A|2378
9Q6S|1|2A|G|2379

Current chains

Chain 2A

23S Ribosomal RNA

Nearby chains

Chain 2S

50S ribosomal protein L18