HL_9Q6T_012
3D structure
- PDB id
- 9Q6T (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin and protein Y at 2.65A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.65 Å
Loop
- Sequence
- GUUCGUGGAGC
- Length
- 11 nucleotides
- Bulged bases
- 9Q6T|1|1A|G|386, 9Q6T|1|1A|G|389
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9Q6T_012 not in the Motif Atlas
- Homologous match to HL_7A0S_013
- Geometric discrepancy: 0.2314
- The information below is about HL_7A0S_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.8
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9Q6T|1|1A|G|382
9Q6T|1|1A|U|383
9Q6T|1|1A|U|384
9Q6T|1|1A|C|385
9Q6T|1|1A|G|386
9Q6T|1|1A|U|387
9Q6T|1|1A|G|388
9Q6T|1|1A|G|389
9Q6T|1|1A|A|390
9Q6T|1|1A|G|391
9Q6T|1|1A|C|392
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L28
- Chain 18
- 50S ribosomal protein L35
- Chain 1P
- 50S ribosomal protein L15
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