HL_9Q6U_066

3D structure

PDB id

9Q6U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin-26 triazole derivative and protein Y at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CGCGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q6U_066 not in the Motif Atlas

Homologous match to HL_8B0X_096

Geometric discrepancy: 0.1261

The information below is about HL_8B0X_096

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9Q6U|1|1A|C|2856
9Q6U|1|1A|G|2857
9Q6U|1|1A|C|2858
9Q6U|1|1A|G|2859
9Q6U|1|1A|A|2860
9Q6U|1|1A|G|2861

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains