HL_9Q6U_077

3D structure

PDB id

9Q6U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin-26 triazole derivative and protein Y at 2.80A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9Q6U|1|1a|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q6U_077 not in the Motif Atlas

Homologous match to HL_8B0X_008

Geometric discrepancy: 0.1278

The information below is about HL_8B0X_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9Q6U|1|1a|C|342
9Q6U|1|1a|U|343
9Q6U|1|1a|A|344
9Q6U|1|1a|C|345
9Q6U|1|1a|G|346
9Q6U|1|1a|G|347

Current chains

Chain 1a

16S Ribosomal RNA

Nearby chains

Chain 1O

50S ribosomal protein L14

Chain 1T

50S ribosomal protein L19

Chain 1t

30S ribosomal protein S20