HL_9Q6V_175

3D structure

PDB id

9Q6V (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with tiamulin-31 triazole derivative and protein Y at 2.85A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.85 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

9Q6V|1|2a|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q6V_175 not in the Motif Atlas

Homologous match to HL_8B0X_008

Geometric discrepancy: 0.0896

The information below is about HL_8B0X_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_61337.7

Basepair signature

cWW-tSW-F

Number of instances in this motif group

72

Unit IDs

9Q6V|1|2a|C|342
9Q6V|1|2a|U|343
9Q6V|1|2a|A|344
9Q6V|1|2a|C|345
9Q6V|1|2a|G|346
9Q6V|1|2a|G|347

Current chains

Chain 2a

16S Ribosomal RNA

Nearby chains

Chain 2O

50S ribosomal protein L14

Chain 2T

50S ribosomal protein L19