HL_9Q7Q_028

3D structure

PDB id

9Q7Q (explore in PDB, NAKB, or RNA 3D Hub)

Description

ABCE1-eRF1-RNC-AMD1C

Experimental method

ELECTRON MICROSCOPY

Resolution

2.86 Å

Loop

Sequence

CGCGGG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9Q7Q_028 not in the Motif Atlas

Homologous match to HL_8GLP_032

Geometric discrepancy: 0.0934

The information below is about HL_8GLP_032

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34789.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

456

Unit IDs

9Q7Q|1|5|C|2317
9Q7Q|1|5|G|2318
9Q7Q|1|5|C|2319
9Q7Q|1|5|G|2320
9Q7Q|1|5|G|2321
9Q7Q|1|5|G|2322

Current chains

Chain 5

28S rRNA

Nearby chains

Chain e

60S ribosomal protein L32

Chain r

eL28