HL_9QEH_043
3D structure
- PDB id
- 9QEH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.08 Å
Loop
- Sequence
- CUG(OMG)GGCGG
- Length
- 9 nucleotides
- Bulged bases
- 9QEH|1|A|G|2277
- QA status
- Modified nucleotides: OMG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QEH_043 not in the Motif Atlas
- Homologous match to HL_4WF9_049
- Geometric discrepancy: 0.0775
- The information below is about HL_4WF9_049
- Detailed Annotation
- LSU P loop
- Broad Annotation
- LSU P loop
- Motif group
- HL_11974.3
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 19
Unit IDs
9QEH|1|A|C|2275
9QEH|1|A|U|2276
9QEH|1|A|G|2277
9QEH|1|A|OMG|2278
9QEH|1|A|G|2279
9QEH|1|A|G|2280
9QEH|1|A|C|2281
9QEH|1|A|G|2282
9QEH|1|A|G|2283
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 8
- Transfer RNA; tRNA
- Chain K
- Large ribosomal subunit protein uL16
- Chain U
- Large ribosomal subunit protein bL27
Coloring options: