HL_9QEH_055
3D structure
- PDB id
- 9QEH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the A2085-methylated 50S ribosome of a MLSb resistant S. aureus strain "MNY196" in complex with solithromycin
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.08 Å
Loop
- Sequence
- CUGAAAGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 9QEH|1|A|G|2778, 9QEH|1|A|C|2782
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9QEH_055 not in the Motif Atlas
- Homologous match to HL_4WF9_062
- Geometric discrepancy: 0.1199
- The information below is about HL_4WF9_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53269.3
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 11
Unit IDs
9QEH|1|A|C|2772
9QEH|1|A|U|2773
9QEH|1|A|G|2774
9QEH|1|A|A|2775
9QEH|1|A|A|2776
9QEH|1|A|A|2777
9QEH|1|A|G|2778
9QEH|1|A|C|2779
9QEH|1|A|A|2780
9QEH|1|A|U|2781
9QEH|1|A|C|2782
9QEH|1|A|U|2783
9QEH|1|A|A|2784
9QEH|1|A|A|2785
9QEH|1|A|G|2786
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain 4
- Large ribosomal subunit protein bL36
- Chain G
- Large ribosomal subunit protein uL6
- Chain H
- Large ribosomal subunit protein uL13
Coloring options: