HL_9QLO_015

3D structure

PDB id

9QLO (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 1

Experimental method

ELECTRON MICROSCOPY

Resolution

2.47 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGC

Length

20 nucleotides

Bulged bases

9QLO|1|L5|G|1178, 9QLO|1|L5|U|1179, 9QLO|1|L5|C|1181, 9QLO|1|L5|C|1182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLO|1|L5|G|1171
9QLO|1|L5|C|1172
9QLO|1|L5|G|1173
9QLO|1|L5|G|1174
9QLO|1|L5|A|1175
9QLO|1|L5|C|1176
9QLO|1|L5|U|1177
9QLO|1|L5|G|1178
9QLO|1|L5|U|1179
9QLO|1|L5|C|1180
9QLO|1|L5|C|1181
9QLO|1|L5|C|1182
9QLO|1|L5|C|1183
9QLO|1|L5|A|1184
9QLO|1|L5|G|1185
9QLO|1|L5|U|1186
9QLO|1|L5|G|1187
9QLO|1|L5|C|1188
9QLO|1|L5|G|1189
9QLO|1|L5|C|1190

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

Ribosomal protein uL16-like