HL_9QLP_015

3D structure

PDB id

9QLP (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - State 2

Experimental method

ELECTRON MICROSCOPY

Resolution

2.75 Å

Loop

Sequence

GCGGACUGUCCCCAGUGCGC

Length

20 nucleotides

Bulged bases

9QLP|1|L5|G|1178, 9QLP|1|L5|U|1179, 9QLP|1|L5|C|1181, 9QLP|1|L5|C|1182

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QLP|1|L5|G|1171
9QLP|1|L5|C|1172
9QLP|1|L5|G|1173
9QLP|1|L5|G|1174
9QLP|1|L5|A|1175
9QLP|1|L5|C|1176
9QLP|1|L5|U|1177
9QLP|1|L5|G|1178
9QLP|1|L5|U|1179
9QLP|1|L5|C|1180
9QLP|1|L5|C|1181
9QLP|1|L5|C|1182
9QLP|1|L5|C|1183
9QLP|1|L5|A|1184
9QLP|1|L5|G|1185
9QLP|1|L5|U|1186
9QLP|1|L5|G|1187
9QLP|1|L5|C|1188
9QLP|1|L5|G|1189
9QLP|1|L5|C|1190

Current chains

Chain L5

28S rRNA

Nearby chains

Chain L7

5S ribosomal RNA; 5S rRNA

Chain LD

60S ribosomal protein L5

Chain LI

Ribosomal protein uL16-like