HL_9QLQ_078

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GUUCCUC

Length

7 nucleotides

Bulged bases

9QLQ|1|L8|U|124, 9QLQ|1|L8|C|125, 9QLQ|1|L8|C|126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QLQ_078 not in the Motif Atlas

Geometric match to HL_1KH6_003

Geometric discrepancy: 0.3497

The information below is about HL_1KH6_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_33487.2

Basepair signature

cWW-cWW

Number of instances in this motif group

3

Unit IDs

9QLQ|1|L8|G|122
9QLQ|1|L8|U|123
9QLQ|1|L8|U|124
9QLQ|1|L8|C|125
9QLQ|1|L8|C|126
9QLQ|1|L8|U|127
9QLQ|1|L8|C|128

Current chains

Chain L8

5.8S rRNA

Nearby chains

Chain L5

Large subunit ribosomal RNA; LSU rRNA

Chain LX

60S ribosomal protein L23a