HL_9QLQ_105

3D structure

PDB id

9QLQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

NMT1-NAC bound human RNC with full length ARF1 - alternative State

Experimental method

ELECTRON MICROSCOPY

Resolution

2.57 Å

Loop

Sequence

GUUAAUUC

Length

8 nucleotides

Bulged bases

9QLQ|1|S2|U|1371

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9QLQ_105 not in the Motif Atlas

Homologous match to HL_9H3G_102

Geometric discrepancy: 0.1236

The information below is about HL_9H3G_102

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_63894.5

Basepair signature

cWW-cWW-F-F-F

Number of instances in this motif group

25

Unit IDs

9QLQ|1|S2|G|1366
9QLQ|1|S2|U|1367
9QLQ|1|S2|U|1368
9QLQ|1|S2|A|1369
9QLQ|1|S2|A|1370
9QLQ|1|S2|U|1371
9QLQ|1|S2|U|1372
9QLQ|1|S2|C|1373

Current chains

Chain S2

18S rRNA

Nearby chains

Chain SR

40S ribosomal protein S17