HL_9QOH_019

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CCUCUCCAGUCCG

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|1249
9QOH|1|A2|C|1250
9QOH|1|A2|U|1251
9QOH|1|A2|C|1252
9QOH|1|A2|U|1253
9QOH|1|A2|C|1254
9QOH|1|A2|C|1255
9QOH|1|A2|A|1256
9QOH|1|A2|G|1257
9QOH|1|A2|U|1258
9QOH|1|A2|C|1259
9QOH|1|A2|C|1260
9QOH|1|A2|G|1261

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A1

Large ribosomal subunit protein uL30

Chain F2

Large ribosomal subunit protein uL4

Chain K2

Large ribosomal subunit protein eL18

Chain V2

Large ribosomal subunit protein eL29