HL_9QOH_022

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

ACGUGCAAAU

Length

10 nucleotides

Bulged bases

9QOH|1|A2|U|1409, 9QOH|1|A2|A|1413, 9QOH|1|A2|A|1414

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|A|1406
9QOH|1|A2|C|1407
9QOH|1|A2|G|1408
9QOH|1|A2|U|1409
9QOH|1|A2|G|1410
9QOH|1|A2|C|1411
9QOH|1|A2|A|1412
9QOH|1|A2|A|1413
9QOH|1|A2|A|1414
9QOH|1|A2|U|1415

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A

Nascent protein chain

Chain E2

Large ribosomal subunit protein uL3

Chain J2

Large ribosomal subunit protein uL22

Chain d2

Large ribosomal subunit protein eL37