HL_9QOH_044

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CGCAGCAG

Length

8 nucleotides

Bulged bases

9QOH|1|A2|C|2549, 9QOH|1|A2|G|2551, 9QOH|1|A2|A|2553

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|2547
9QOH|1|A2|G|2548
9QOH|1|A2|C|2549
9QOH|1|A2|A|2550
9QOH|1|A2|G|2551
9QOH|1|A2|C|2552
9QOH|1|A2|A|2553
9QOH|1|A2|G|2554

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain A

Nascent protein chain

Chain F2

Large ribosomal subunit protein uL4

Chain J2

Large ribosomal subunit protein uL22

Chain d2

Large ribosomal subunit protein eL37

Chain f2

Large ribosomal subunit protein eL39