HL_9QOH_047

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GGGCGGCCGGCGCCUAGC

Length

18 nucleotides

Bulged bases

9QOH|1|A2|U|3251, 9QOH|1|A2|A|3252

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|G|2656
9QOH|1|A2|G|2657
9QOH|1|A2|G|2658
9QOH|1|A2|C|3240
9QOH|1|A2|G|3241
9QOH|1|A2|G|3242
9QOH|1|A2|C|3243
9QOH|1|A2|C|3244
9QOH|1|A2|G|3245
9QOH|1|A2|G|3246
9QOH|1|A2|C|3247
9QOH|1|A2|G|3248
9QOH|1|A2|C|3249
9QOH|1|A2|C|3250
9QOH|1|A2|U|3251
9QOH|1|A2|A|3252
9QOH|1|A2|G|3253
9QOH|1|A2|C|3254

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain L2

Large ribosomal subunit protein eL19

Chain u2

Small ribosomal subunit protein eS8

Chain w2

Small ribosomal subunit protein uS17