HL_9QOH_071

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

CUGAACGCCUCUAAG

Length

15 nucleotides

Bulged bases

9QOH|1|A2|G|4346, 9QOH|1|A2|C|4350

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|A2|C|4340
9QOH|1|A2|U|4341
9QOH|1|A2|G|4342
9QOH|1|A2|A|4343
9QOH|1|A2|A|4344
9QOH|1|A2|C|4345
9QOH|1|A2|G|4346
9QOH|1|A2|C|4347
9QOH|1|A2|C|4348
9QOH|1|A2|U|4349
9QOH|1|A2|C|4350
9QOH|1|A2|U|4351
9QOH|1|A2|A|4352
9QOH|1|A2|A|4353
9QOH|1|A2|G|4354

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain C1

Large ribosomal subunit protein uL6

Chain I2

Large ribosomal subunit protein uL13

Chain g2

Ubiquitin-ribosomal protein eL40 fusion protein