3D structure

PDB id
9QOH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Mouse Ribosome POST translocation state
Experimental method
ELECTRON MICROSCOPY
Resolution
2.78 Å

Loop

Sequence
UCAGGG
Length
6 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

9QOH|1|m2|U|418
9QOH|1|m2|C|419
9QOH|1|m2|A|420
9QOH|1|m2|G|421
9QOH|1|m2|G|422
9QOH|1|m2|G|423

Current chains

Chain m2
18S ribosomal RNA

Nearby chains

Chain E3
Small ribosomal subunit protein uS12
Chain J3
Small ribosomal subunit protein uS5
Chain L3
Small ribosomal subunit protein uS4
Chain P3
Small ribosomal subunit protein uS8
Chain w2
Small ribosomal subunit protein uS17

Coloring options:

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