HL_9QOH_103

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

AGGUGAAAUU

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|m2|A|959
9QOH|1|m2|G|960
9QOH|1|m2|G|961
9QOH|1|m2|U|962
9QOH|1|m2|G|963
9QOH|1|m2|A|964
9QOH|1|m2|A|965
9QOH|1|m2|A|966
9QOH|1|m2|U|967
9QOH|1|m2|U|968

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain A2

Large subunit ribosomal RNA; LSU rRNA

Chain Bx

messenger RNA

Chain O3

Small ribosomal subunit protein uS11

Chain n2

Transfer RNA; tRNA

Chain s2

Small ribosomal subunit protein uS7