HL_9QOH_109

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

GAC(B8N)CAACAC

Length

10 nucleotides

Bulged bases

9QOH|1|m2|A|1255

QA status

Modified nucleotides: B8N

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|m2|G|1247
9QOH|1|m2|A|1248
9QOH|1|m2|C|1249
9QOH|1|m2|B8N|1250
9QOH|1|m2|C|1251
9QOH|1|m2|A|1252
9QOH|1|m2|A|1253
9QOH|1|m2|C|1254
9QOH|1|m2|A|1255
9QOH|1|m2|C|1256

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain Bv

Transfer RNA; tRNA

Chain C3

Small ribosomal subunit protein uS10

Chain H3

Small ribosomal subunit protein uS14

Chain y2

Small ribosomal subunit protein uS9