HL_9QOH_110

3D structure

PDB id

9QOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome POST translocation state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.78 Å

Loop

Sequence

AUUGAUAGCU

Length

10 nucleotides

Bulged bases

9QOH|1|m2|U|1302, 9QOH|1|m2|G|1304

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QOH|1|m2|A|1297
9QOH|1|m2|U|1298
9QOH|1|m2|U|1299
9QOH|1|m2|G|1300
9QOH|1|m2|A|1301
9QOH|1|m2|U|1302
9QOH|1|m2|A|1303
9QOH|1|m2|G|1304
9QOH|1|m2|C|1305
9QOH|1|m2|U|1306

Current chains

Chain m2

18S ribosomal RNA

Nearby chains

Chain H3

Small ribosomal subunit protein uS14

Chain U3

Ubiquitin-ribosomal protein eS31 fusion protein

Chain x2

Small ribosomal subunit protein uS19