HL_9QQP_008

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

CUUGGGAAUG

Length

10 nucleotides

Bulged bases

9QQP|1|A2|G|294, 9QQP|1|A2|A|295, 9QQP|1|A2|A|296

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|C|289
9QQP|1|A2|U|290
9QQP|1|A2|U|291
9QQP|1|A2|G|292
9QQP|1|A2|G|293
9QQP|1|A2|G|294
9QQP|1|A2|A|295
9QQP|1|A2|A|296
9QQP|1|A2|U|297
9QQP|1|A2|G|298

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain F1

Large ribosomal subunit protein eL13

Chain H1

Large ribosomal subunit protein eL15

Chain U2

Large ribosomal subunit protein uL15

Chain i2

Large ribosomal subunit protein eL42