HL_9QQP_037

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GUUCAGAUCC

Length

10 nucleotides

Bulged bases

9QQP|1|A2|U|2285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|G|2278
9QQP|1|A2|U|2279
9QQP|1|A2|U|2280
9QQP|1|A2|C|2281
9QQP|1|A2|A|2282
9QQP|1|A2|G|2283
9QQP|1|A2|A|2284
9QQP|1|A2|U|2285
9QQP|1|A2|C|2286
9QQP|1|A2|C|2287

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain L2

Large ribosomal subunit protein eL19

Chain R2

Large ribosomal subunit protein uL23

Chain a2

Large ribosomal subunit protein eL34