HL_9QQP_050

3D structure

PDB id

9QQP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Mouse Ribosome rotated-2 PRE state

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

AGUAACUAUGACU

Length

13 nucleotides

Bulged bases

9QQP|1|A2|A|3416

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9QQP|1|A2|A|3412
9QQP|1|A2|G|3413
9QQP|1|A2|U|3414
9QQP|1|A2|A|3415
9QQP|1|A2|A|3416
9QQP|1|A2|C|3417
9QQP|1|A2|U|3418
9QQP|1|A2|A|3419
9QQP|1|A2|U|3420
9QQP|1|A2|G|3421
9QQP|1|A2|A|3422
9QQP|1|A2|C|3423
9QQP|1|A2|U|3424

Current chains

Chain A2

28S ribosomal RNA

Nearby chains

Chain Bv

Transfer RNA; tRNA

Chain T3

Ubiquitin-like FUBI-ribosomal protein eS30 fusion protein

Chain m2

Small subunit ribosomal RNA; SSU rRNA